P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAATGACTAATATAATTCGAA19.11843e-06
AAATGACTTGCACGGCTCTGA19.11843e-06
AAATGAGCATTGGAATCGTCA19.11843e-06
AAATGAGGACCCATACGAGAA19.11843e-06
AAATGAGGTTCTTTTTTTAAA19.11843e-06
AAATGAGGTTTGTATGCGGGA19.11843e-06
AAATGAGTAATAGTAATTCAG19.11843e-06
AAATGAGTATATCATGACCAA19.11843e-06
AAATGAGTCCAGTACTTGAAA19.11843e-06
AAATGAGTCGTTCCTTGTGGA19.11843e-06
AAATGAGTGGCGTCATCGCGA19.11843e-06
AAATGAGTTCAATTATATGTA19.11843e-06
AAATGAGTTCCCTTGTTACAA19.11843e-06
AAATGATAAAATGTACTAGTA19.11843e-06
AAATGATAATGAATTATAATA19.11843e-06
AAATGATATCGTAGTAAAAAA19.11843e-06
AAATGATATTTCATGCGATTA21.82369e-05
AAATGATCGAGTATAAGTCCA19.11843e-06
AAATGATCGGCTTAGACAGCA19.11843e-06
AAATGATGATTTCCAAAGATA19.11843e-06
AAATGATGCGTTTGTGTCCTA19.11843e-06
AAATGATGGTATGAGACACCA19.11843e-06
AAATGATGTTTCAAAACAATA19.11843e-06
AAATGATTAGGTGAACCAATA19.11843e-06
AAATGCAACGCGCTGAATTCA19.11843e-06

Read fractions use all reads in this source file as the denominator.