P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AACTAAATTAATACATCCAAA19.11843e-06
AACTAACATAAGATTCGGTCA19.11843e-06
AACTAACATCAAGGTATATGA19.11843e-06
AACTAACATCACTCGCCTAAA19.11843e-06
AACTAACCCTCCCCATCACAA19.11843e-06
AACTAACCGTCATCCAAAGGA19.11843e-06
AACTAAGATACTGAGAACTTA19.11843e-06
AACTAAGCGGAAGCGGATGGA19.11843e-06
AACTAAGGATCATGCAATTCA19.11843e-06
AACTAAGGGCGTCGGGATGCA19.11843e-06
AACTAAGTCGTACCATGGTCA19.11843e-06
AACTAAGTCGTGCCGATCGTA19.11843e-06
AACTAAGTCTCCTGAGGTCAA19.11843e-06
AACTAAGTGAAAAGGTTTTGA19.11843e-06
AACTAAGTGTAAGATTGGAGA19.11843e-06
AACTAAGTTACAGGTGAAGTA19.11843e-06
AACTAAGTTAGCGTCTTGTGA19.11843e-06
AACTAATACAGGCTTGTCGTA19.11843e-06
AACTAATATTGTAAGTACTGA19.11843e-06
AACTAATCCACTACAGAAATA19.11843e-06
AACTAATCGACGAGATGCCAA19.11843e-06
AACTAATCGTATTCTTACATA19.11843e-06
AACTAATCTAATCAGGTAATA21.82369e-05
AACTAATGCAGGTCGACTAGA19.11843e-06
AACTAATGGGTATGCTATAAA19.11843e-06

Read fractions use all reads in this source file as the denominator.