P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGCCATGAACTAAAGAG19.11843e-06
AAAAGGCTCCGGATGAAGATA19.11843e-06
AAAAGGGATTACTTGCGCTAA19.11843e-06
AAAAGGGGAGAGAAGAGGTTA19.11843e-06
AAAAGGGGCATAAGTGATTGA19.11843e-06
AAAAGGGGGTGTATCGTTGAA19.11843e-06
AAAAGGGTAACTATCCACATA19.11843e-06
AAAAGGGTGAAGGAACGATGA19.11843e-06
AAAAGGGTGTGCCTAATTGTA19.11843e-06
AAAAGGGTTAAATCCCTGGAA19.11843e-06
AAAAGGTACAATGTAAAATCA19.11843e-06
AAAAGGTACTCCATAAAGTTA19.11843e-06
AAAAGGTAGACTATTTCTTTA19.11843e-06
AAAAGGTCCCGAGATCGTAGA19.11843e-06
AAAAGGTTAATATGCGGGAGA19.11843e-06
AAAAGGTTACCTCCTGAGCAA21.82369e-05
AAAAGGTTATTGCTGCACGAA19.11843e-06
AAAAGGTTCAACACATAAGAA19.11843e-06
AAAAGGTTGGTCCTGAACATA19.11843e-06
AAAAGTAACGGGCGCGCCGTA19.11843e-06
AAAAGTAACTTAGCTAGATAA19.11843e-06
AAAAGTAACTTGCTTTTTTAA19.11843e-06
AAAAGTAATACGTAATTATCA19.11843e-06
AAAAGTAATTCAACTCAGGTA19.11843e-06
AAAAGTACATCCCGCAATACA19.11843e-06

Read fractions use all reads in this source file as the denominator.