P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAGAATTCAAATAACTATCGA19.11843e-06
AAGAATTCACCCTAATTACAA19.11843e-06
AAGAATTCCGGTCTTTGTTGA19.11843e-06
AAGAATTCGCATCCAAATGTA19.11843e-06
AAGAATTCTAGCTCTCTCAAA19.11843e-06
AAGAATTGAAAACATCCACAA19.11843e-06
AAGAATTGATTTACTTTGGTA19.11843e-06
AAGAATTGTATCTCATTACTA19.11843e-06
AAGAATTTAAAAGGTGTATTA19.11843e-06
AAGAATTTATTTGTTCCTCTA19.11843e-06
AAGACAAAGGGCGAGGATGAA19.11843e-06
AAGACAAATTAGTACAGTTAA19.11843e-06
AAGACAAATTCGTGGGATAAA19.11843e-06
AAGACAAGACTTTGCACCGGA19.11843e-06
AAGACAAGCATCCTTATAGAA19.11843e-06
AAGACAAGTACCTGCCATTAA19.11843e-06
AAGACAAGTTTATCAGGCATA19.11843e-06
AAGACAATTCTTGCCATTAGA19.11843e-06
AAGACACAAGCATGGTCAAGA19.11843e-06
AAGACACCACATCAACCCACA19.11843e-06
AAGACACTTGTCAATGACATA19.11843e-06
AAGACAGAATCTAAAGACCTA19.11843e-06
AAGACAGACAAGCGCGGCACA19.11843e-06
AAGACAGAGTGCATGATGAAA19.11843e-06
AAGACAGGACCTTAGTGTTCA19.11843e-06

Read fractions use all reads in this source file as the denominator.