P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130402

RV29_s

Reads
109,668
Distinct strings in file
108,151
File size
0.7 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130402
Sample:
SAMEA13317638
SHA-256
e167c46963be1c84401f424b6e00797b65135b86b677b4b14d5396aeb2525151

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACACCATTTAATTTTTGGA19.11843e-06
AAACACCTGAAACTCATTCAA19.11843e-06
AAACACGAACGTCAGATTCGA19.11843e-06
AAACACGACAAGGGGGATTAA19.11843e-06
AAACACGAGCTATCTCCTGTA19.11843e-06
AAACACGGAGTTCATCTATTA19.11843e-06
AAACACGTGCCCCTGTGTACA19.11843e-06
AAACACGTTGTTAGCGGATTA19.11843e-06
AAACACTACACGCCAGGTTCA19.11843e-06
AAACACTCCTCATCGTCATGA19.11843e-06
AAACACTCGTGATTATAGAGA19.11843e-06
AAACACTCTTTTTTTAACGTA19.11843e-06
AAACACTGGGGGGTTGCAAGA19.11843e-06
AAACAGACGGCAACTTTAACA19.11843e-06
AAACAGAGGAATTCGTTACGA19.11843e-06
AAACAGATGCAGCCATCAAGA19.11843e-06
AAACAGCAAATGTTAAAGGAA19.11843e-06
AAACAGCGTTTATGGATGTTA19.11843e-06
AAACAGCTAACCATTCATTAA19.11843e-06
AAACAGCTCCTTTTTTTGCCA19.11843e-06
AAACAGCTGAGAGTAGAGTGA19.11843e-06
AAACAGCTGGTGGGGTAGGGA19.11843e-06
AAACAGCTTTTTAATCTGTGA19.11843e-06
AAACAGGAGAGTTCTATGCCA19.11843e-06
AAACAGGCTAGATATTTATCA19.11843e-06

Read fractions use all reads in this source file as the denominator.