P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTATCCTTTTGTATATA12.84414e-06
AAAAGTATCGTTTATATGTGA12.84414e-06
AAAAGTATCTTGCCAAGGGTA12.84414e-06
AAAAGTATCTTTGTTCATTGA12.84414e-06
AAAAGTATGTCATACACAAAA12.84414e-06
AAAAGTATTAGTCTAATAGGA12.84414e-06
AAAAGTATTCAAGTTTCTCGA12.84414e-06
AAAAGTATTCCGTTATCCTGA12.84414e-06
AAAAGTATTGGCTCCATCATA12.84414e-06
AAAAGTATTTATATATTCTAA12.84414e-06
AAAAGTCAATGTACCGTTTGA12.84414e-06
AAAAGTCAATTCTCAATTTCA12.84414e-06
AAAAGTCATTTCTCCCTCTAA12.84414e-06
AAAAGTCCATCTGTTATGCTA12.84414e-06
AAAAGTCCCATAGCCGCCCGA12.84414e-06
AAAAGTCCCCTTATGTACGAA12.84414e-06
AAAAGTCCTCTGAAGTAGTAA12.84414e-06
AAAAGTCCTGAATCCCAGGAA12.84414e-06
AAAAGTCCTTATAATCTTCAA12.84414e-06
AAAAGTCGCTAACAAATTGAA12.84414e-06
AAAAGTCGGTGCACTGGAGGA12.84414e-06
AAAAGTCGTAATCGGGCACAA12.84414e-06
AAAAGTCTAATATCAGACGCA12.84414e-06
AAAAGTCTGACGAACGTAGCA12.84414e-06
AAAAGTCTTATTCGTTGGGGA12.84414e-06

Read fractions use all reads in this source file as the denominator.