P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATATTTTGAGTTAGTGTA12.84414e-06
AAAATCAAATCTTTTGAATAA12.84414e-06
AAAATCAAGTAATACGTTAGA12.84414e-06
AAAATCAATCTATATCACTAA12.84414e-06
AAAATCAATTGTTGAAATTCA12.84414e-06
AAAATCACAAAGTTAATTCGA12.84414e-06
AAAATCACCAGAGTACACTTA12.84414e-06
AAAATCACCATTTCCGGTATA12.84414e-06
AAAATCACGACTTATAGTATA12.84414e-06
AAAATCACTTTTTGATCTTTA12.84414e-06
AAAATCAGATGGAACGTATTA12.84414e-06
AAAATCAGCACGAGTGCTTCA12.84414e-06
AAAATCAGCGTATAGATATAA12.84414e-06
AAAATCAGGGGACGTCCGTTA12.84414e-06
AAAATCAGTCCGATTTCCCTA12.84414e-06
AAAATCATAATTCGCATCTTA12.84414e-06
AAAATCATACTAGCCCCCCGA12.84414e-06
AAAATCATAGATTGTGAAAGA12.84414e-06
AAAATCATATCAGGTTTTTTA12.84414e-06
AAAATCATATCAGTAGCTGTA12.84414e-06
AAAATCATCAAAATGAACTTA12.84414e-06
AAAATCATCACGCTCTTGACA12.84414e-06
AAAATCATGCGCTTGGCCCGA12.84414e-06
AAAATCATGTCGTCTCGGGAA12.84414e-06
AAAATCATGTTTTTCCATTAA12.84414e-06

Read fractions use all reads in this source file as the denominator.