P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGAATGCTCAGTAGTGGTA12.84414e-06
AAAGAATGGAGTGGTGGTGGA12.84414e-06
AAAGAATTAAGGTATACCTGA12.84414e-06
AAAGAATTATATCTTATTCCA12.84414e-06
AAAGAATTATATTATTTTAGA12.84414e-06
AAAGAATTCAGCTACTTAGAA12.84414e-06
AAAGAATTCATGAGGTCTCTA12.84414e-06
AAAGAATTCTACTTGTTGGTA12.84414e-06
AAAGAATTGAAGAGAGTCGGA12.84414e-06
AAAGAATTGCCGATTGACATA12.84414e-06
AAAGAATTGGACATTCCATTA12.84414e-06
AAAGAATTGTAGCCTTTGGCA12.84414e-06
AAAGAATTGTATATCAATTGA12.84414e-06
AAAGAATTGTCTAGACTAAAA12.84414e-06
AAAGAATTTAATATAATTTTA12.84414e-06
AAAGAATTTCGTACCATGTTA12.84414e-06
AAAGAATTTTTGATTATGTCA12.84414e-06
AAAGACAAATGGAAGACGTAA12.84414e-06
AAAGACAATAAATAGCTATTA25.68828e-06
AAAGACAATCAACGTACACTA12.84414e-06
AAAGACAATTAGCACTAATCA12.84414e-06
AAAGACAATTTTAATAAGTCA12.84414e-06
AAAGACACCAGGCAATTATTA12.84414e-06
AAAGACACCGGATATAATGTA12.84414e-06
AAAGACACTAAAACCGTTGTA12.84414e-06

Read fractions use all reads in this source file as the denominator.