P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGCATCGGGTCGGACTAAA12.84414e-06
AAAGCATGATATGAGCGGTTA12.84414e-06
AAAGCATGCTCCAGTCCAGAA12.84414e-06
AAAGCATGCTTATTTAAATTA12.84414e-06
AAAGCATGGCTATCAGGTAGA12.84414e-06
AAAGCATGTGTCTCGAACTAA12.84414e-06
AAAGCATTACGTTCCTCTGTA12.84414e-06
AAAGCATTATGTTAATAAGCA12.84414e-06
AAAGCATTCCCGTGGATATCA12.84414e-06
AAAGCATTCTCATTGTATATA12.84414e-06
AAAGCATTCTCCACCTCCCCA12.84414e-06
AAAGCATTGCCACCTCAACAA12.84414e-06
AAAGCATTGTATTAAACCATA12.84414e-06
AAAGCATTGTTTCCCTATGAA12.84414e-06
AAAGCATTTCCTATTGACCAA12.84414e-06
AAAGCATTTCTCTTGGTATCA12.84414e-06
AAAGCCAAATTCACTGCAGCA12.84414e-06
AAAGCCAACACATTGATATGA12.84414e-06
AAAGCCAACCTTTGTCAATAA12.84414e-06
AAAGCCAAGGCATTCGATCGA12.84414e-06
AAAGCCAAGTGCTGACTTAAG12.84414e-06
AAAGCCAATAAAGAGGCCGAA12.84414e-06
AAAGCCAATTGAGGTATGGAA12.84414e-06
AAAGCCACAATCTATTCTTTA12.84414e-06
AAAGCCAGAAAATGAATCTTA12.84414e-06

Read fractions use all reads in this source file as the denominator.