P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGGCAGTTAGTTAACAAGA12.84414e-06
AAAGGCATCTTATCCTTTTTA12.84414e-06
AAAGGCATGTACGTGTCCTCA12.84414e-06
AAAGGCATTGGCTATTCTCAA12.84414e-06
AAAGGCCATCTAGGTAGTTAA12.84414e-06
AAAGGCCCATGGGAGTTGGTA12.84414e-06
AAAGGCCGATATCTTTCAATA12.84414e-06
AAAGGCCGGGAACTAGGTGTA12.84414e-06
AAAGGCCGGGGCTATGTATCA12.84414e-06
AAAGGCCGGTATTAAAGTTAA12.84414e-06
AAAGGCCTCAACTCCAACTTA12.84414e-06
AAAGGCGAACGTATCTATCGA12.84414e-06
AAAGGCGAATTCTACTTAAGA12.84414e-06
AAAGGCGAATTTCCTCCAGCA12.84414e-06
AAAGGCGATAGGGAGTGGGCA12.84414e-06
AAAGGCGCGTTAGGCAATCGA12.84414e-06
AAAGGCGGAAAAAGTTGTGAA12.84414e-06
AAAGGCGGAGGAAACACTCGA12.84414e-06
AAAGGCGGATAGTGGTGCACA12.84414e-06
AAAGGCGGATGTTAGACTATA12.84414e-06
AAAGGCGGTAGAGCCAAACAA12.84414e-06
AAAGGCGGTAGGGAATGGGGA12.84414e-06
AAAGGCGGTGGCCGCGGACCA12.84414e-06
AAAGGCGTACTAAATCAGCTA25.68828e-06
AAAGGCGTATAGGATCTATAA12.84414e-06

Read fractions use all reads in this source file as the denominator.