P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAACAAACTAGATTTTTTAA12.84414e-06
AAAACAAACTTGACTCAGTAA12.84414e-06
AAAACAACATTCCCTATCTCA12.84414e-06
AAAACAACCAACAATAAATAA25.68828e-06
AAAACAACCAGGCTTGTAATA12.84414e-06
AAAACAACCATCATCTTCAAA12.84414e-06
AAAACAACCTAAGCCTCCTAA12.84414e-06
AAAACAACCTACTCTCCTATA12.84414e-06
AAAACAACCTCGGCACAAGTA12.84414e-06
AAAACAACGAGGAATTTTGAA12.84414e-06
AAAACAACGTTTTTGACCATA12.84414e-06
AAAACAACTAGATCTCGTGTA12.84414e-06
AAAACAACTTTCACGTATAAA12.84414e-06
AAAACAACTTTGAGCACCAGA12.84414e-06
AAAACAAGAATAATTACTAAA12.84414e-06
AAAACAAGACATAGAATCCGA12.84414e-06
AAAACAAGAGACTCTCATAAA12.84414e-06
AAAACAAGAGCAGGTGCAACA12.84414e-06
AAAACAAGGTGGTTGAGGAAA12.84414e-06
AAAACAATAATCCGTCAACTA12.84414e-06
AAAACAATAATGCCGAATTCA12.84414e-06
AAAACAATACTGATGCTACCA25.68828e-06
AAAACAATCCTAGCTTATATA12.84414e-06
AAAACAATGAAGAAAGAGCGA12.84414e-06
AAAACAATGGCTCTCTTAATA12.84414e-06

Read fractions use all reads in this source file as the denominator.