P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130403

RV30_s

Reads
351,600
Distinct strings in file
345,194
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130403
Sample:
SAMEA13317639
SHA-256
fc48f3d45a0796476f17c3c101ea4a1e4a797aa88ce19002b3032180c9f03bec

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGGAGTGGTATAGATTAG12.84414e-06
AAAAGGATAAAACAATTGGAA12.84414e-06
AAAAGGATACACTTCCGCTTA12.84414e-06
AAAAGGATATCGAGACTATGA12.84414e-06
AAAAGGATATTATACCGACAA12.84414e-06
AAAAGGATCAAGTTAACCCCA12.84414e-06
AAAAGGATCCCCTTAAATATA12.84414e-06
AAAAGGATCTTCATAAATTAA12.84414e-06
AAAAGGATGGTTTAAGTCTAA25.68828e-06
AAAAGGATGTAGCCACCAAGA12.84414e-06
AAAAGGATTATTATATTAGAA12.84414e-06
AAAAGGATTGGTCCCATATAA12.84414e-06
AAAAGGATTGTCTACTTAGAA12.84414e-06
AAAAGGCAGGTGTAAGGTATA12.84414e-06
AAAAGGCCAGAGCGTGTAAAA12.84414e-06
AAAAGGCCTTTAAGGATTGAA12.84414e-06
AAAAGGCGATGGGTAGCTTCA12.84414e-06
AAAAGGCGGTCCTGAAAATCA12.84414e-06
AAAAGGCTCAACTGAAGAACA12.84414e-06
AAAAGGCTGATCTAAGGGAAA12.84414e-06
AAAAGGCTTATGACCATCGGA12.84414e-06
AAAAGGCTTTGAGGTAGGGCA12.84414e-06
AAAAGGGACTATTGCACTCAA12.84414e-06
AAAAGGGAGTTCAATATTGTA12.84414e-06
AAAAGGGGAGGCTTGCTTAAA12.84414e-06

Read fractions use all reads in this source file as the denominator.