These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAAAAAAAAAAAAAAAAA | 9 | 2.78904e-05 |
| AAAAAAAAAAAAAAAAAAAGT | 1 | 3.09893e-06 |
| AAAAAAAAAAAAAAAACAAAA | 1 | 3.09893e-06 |
| AAAAAAAAAAAATTGTCGAGA | 1 | 3.09893e-06 |
| AAAAAAAAAAACAAAATAAAT | 1 | 3.09893e-06 |
| AAAAAAAAAAGTGTTAAGACA | 1 | 3.09893e-06 |
| AAAAAAAAATACAATTATATG | 1 | 3.09893e-06 |
| AAAAAAAAATGTGAGTAGATA | 1 | 3.09893e-06 |
| AAAAAAAAATTATTACTACCA | 1 | 3.09893e-06 |
| AAAAAAAAATTGGGGCTAGTA | 1 | 3.09893e-06 |
| AAAAAAAACTGAACTATATAA | 1 | 3.09893e-06 |
| AAAAAAAAGAAGGTGGAAGTA | 1 | 3.09893e-06 |
| AAAAAAAAGGGCGAGTCATAA | 1 | 3.09893e-06 |
| AAAAAAAAGTTTTTACTCCAA | 1 | 3.09893e-06 |
| AAAAAAAATAATTAAGGGTGA | 1 | 3.09893e-06 |
| AAAAAAAATATGAAGTACAAA | 1 | 3.09893e-06 |
| AAAAAAAATATTAAATATGGA | 1 | 3.09893e-06 |
| AAAAAAAATATTATTGGTGAA | 1 | 3.09893e-06 |
| AAAAAAAATCCTAGTGGGAGA | 1 | 3.09893e-06 |
| AAAAAAAATCGGTACTTAGTA | 1 | 3.09893e-06 |
| AAAAAAAATGATTTTTGCGTA | 1 | 3.09893e-06 |
| AAAAAAAATTAATTATTAATA | 2 | 6.19786e-06 |
| AAAAAAAATTACACTTACTTA | 1 | 3.09893e-06 |
| AAAAAAAATTATTGACTAAGA | 1 | 3.09893e-06 |
| AAAAAAAATTCAATTATAGAA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.