These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAATATTAAATATTAATA | 4 | 1.23957e-05 |
| AAAAAATATTATATTTAATAA | 1 | 3.09893e-06 |
| AAAAAATATTCATAACCAAAA | 1 | 3.09893e-06 |
| AAAAAATATTCTGGGTGATCA | 1 | 3.09893e-06 |
| AAAAAATATTTCGTAACTCAA | 1 | 3.09893e-06 |
| AAAAAATCAAAATGAAATGGA | 1 | 3.09893e-06 |
| AAAAAATCAATGTATTGGGAA | 1 | 3.09893e-06 |
| AAAAAATCACTTGTTAGGGAA | 1 | 3.09893e-06 |
| AAAAAATCATACTTCTTACAA | 1 | 3.09893e-06 |
| AAAAAATCATCAGGTTGAATA | 1 | 3.09893e-06 |
| AAAAAATCATGAGCGATGGGA | 1 | 3.09893e-06 |
| AAAAAATCATTATTAATTATA | 1 | 3.09893e-06 |
| AAAAAATCCTTGTTGTCAGGA | 1 | 3.09893e-06 |
| AAAAAATCGCCTGGGATAATA | 1 | 3.09893e-06 |
| AAAAAATCGTCGACCTCGTTA | 1 | 3.09893e-06 |
| AAAAAATCTATATTACTATTA | 1 | 3.09893e-06 |
| AAAAAATCTTAGGTTCTTACA | 1 | 3.09893e-06 |
| AAAAAATCTTATGTCAATACA | 1 | 3.09893e-06 |
| AAAAAATCTTCCCGTACTGAA | 1 | 3.09893e-06 |
| AAAAAATGATAGATATAACTA | 1 | 3.09893e-06 |
| AAAAAATGATCAAGAACAACA | 1 | 3.09893e-06 |
| AAAAAATGATTTTCTCTATAA | 1 | 3.09893e-06 |
| AAAAAATGCAAAACTATTCAA | 1 | 3.09893e-06 |
| AAAAAATGCAATGATTGAGAA | 1 | 3.09893e-06 |
| AAAAAATGGAACTTCTTAACA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.