These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATATATATGAGTAAAGTA | 1 | 3.09893e-06 |
| AAAATATATATTTAAAATATA | 1 | 3.09893e-06 |
| AAAATATATATTTAGGCATAA | 1 | 3.09893e-06 |
| AAAATATATATTTATATCTTA | 1 | 3.09893e-06 |
| AAAATATATATTTGTATTAAA | 1 | 3.09893e-06 |
| AAAATATATATTTTATCATAA | 1 | 3.09893e-06 |
| AAAATATATATTTTTATTGTA | 1 | 3.09893e-06 |
| AAAATATATCTAATTGGATAA | 1 | 3.09893e-06 |
| AAAATATATCTGATTATGTAA | 1 | 3.09893e-06 |
| AAAATATATGAAGTGGGATCA | 1 | 3.09893e-06 |
| AAAATATATGAGAAATTATTA | 1 | 3.09893e-06 |
| AAAATATATGAGACCTGGGCA | 1 | 3.09893e-06 |
| AAAATATATTAGCAATGTTAA | 1 | 3.09893e-06 |
| AAAATATATTATATTTAGAAA | 1 | 3.09893e-06 |
| AAAATATATTCAATATTAATA | 1 | 3.09893e-06 |
| AAAATATATTGTATCACCCCA | 1 | 3.09893e-06 |
| AAAATATATTTAATACTTAAA | 1 | 3.09893e-06 |
| AAAATATATTTACAATCACCA | 1 | 3.09893e-06 |
| AAAATATATTTGTGATGATTA | 1 | 3.09893e-06 |
| AAAATATATTTTCGCAATTGA | 1 | 3.09893e-06 |
| AAAATATATTTTGGAATTGAA | 1 | 3.09893e-06 |
| AAAATATCACGTCGATAACAA | 1 | 3.09893e-06 |
| AAAATATCAGTAGCCATGTTA | 1 | 3.09893e-06 |
| AAAATATCATACTGAGGTAGA | 1 | 3.09893e-06 |
| AAAATATCATAGGCAACTTTA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.