These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAATTATACTTAAAAATA | 1 | 3.09893e-06 |
| AAAAAATTATATAAGCTTATA | 1 | 3.09893e-06 |
| AAAAAATTATCTTCGTGTTGA | 1 | 3.09893e-06 |
| AAAAAATTATGTAGAACTGGA | 1 | 3.09893e-06 |
| AAAAAATTATGTGGAATTGGA | 1 | 3.09893e-06 |
| AAAAAATTATTTTTCCATACA | 1 | 3.09893e-06 |
| AAAAAATTCACATATTTAGTA | 1 | 3.09893e-06 |
| AAAAAATTCATTATACCAATA | 1 | 3.09893e-06 |
| AAAAAATTGATAATTATTATG | 1 | 3.09893e-06 |
| AAAAAATTGTAAGATGTGCAA | 1 | 3.09893e-06 |
| AAAAAATTGTTATTAATACAA | 2 | 6.19786e-06 |
| AAAAAATTTAAGGATTTCCTA | 1 | 3.09893e-06 |
| AAAAAATTTAATTGAAGTACA | 1 | 3.09893e-06 |
| AAAAAATTTATATTATAAATA | 1 | 3.09893e-06 |
| AAAAAATTTCATATTTCTATA | 1 | 3.09893e-06 |
| AAAAAATTTCGAATATATCAA | 1 | 3.09893e-06 |
| AAAAAATTTGTATAAGATAAA | 1 | 3.09893e-06 |
| AAAAAATTTGTGGTAAACCAG | 1 | 3.09893e-06 |
| AAAAAATTTTGGTTTTTGCTA | 1 | 3.09893e-06 |
| AAAAAATTTTGTGTTGCATGA | 1 | 3.09893e-06 |
| AAAAAATTTTTTTATGGTAAA | 1 | 3.09893e-06 |
| AAAAAATTTTTTTCCATAAGA | 1 | 3.09893e-06 |
| AAAAACAAAAACGCATAAAAA | 1 | 3.09893e-06 |
| AAAAACAAAAGGGGCTGAAAA | 1 | 3.09893e-06 |
| AAAAACAAAAGTAATCCTTTA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.