These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTAATAAGAAATATATA | 5 | 1.54947e-05 |
| AAAATTAATAAGCAAATCACA | 1 | 3.09893e-06 |
| AAAATTAATAATGAAAAATGA | 1 | 3.09893e-06 |
| AAAATTAATAATTAATATTAA | 4 | 1.23957e-05 |
| AAAATTAATAATTATCTTGTA | 1 | 3.09893e-06 |
| AAAATTAATAATTCATAATTA | 2 | 6.19786e-06 |
| AAAATTAATAATTTAATAGCA | 1 | 3.09893e-06 |
| AAAATTAATACGTAAAGTGTA | 1 | 3.09893e-06 |
| AAAATTAATACTCCCTAGAAA | 1 | 3.09893e-06 |
| AAAATTAATATAAGGTTAATA | 1 | 3.09893e-06 |
| AAAATTAATATAGTCGACGAA | 1 | 3.09893e-06 |
| AAAATTAATATCGAACATATA | 1 | 3.09893e-06 |
| AAAATTAATATGGAACTAAAA | 1 | 3.09893e-06 |
| AAAATTAATATGTATAAATGA | 1 | 3.09893e-06 |
| AAAATTAATATTGATTTAATA | 1 | 3.09893e-06 |
| AAAATTAATATTTTAATAAAA | 1 | 3.09893e-06 |
| AAAATTAATATTTTTATTTCA | 1 | 3.09893e-06 |
| AAAATTAATCAACACTCTATA | 1 | 3.09893e-06 |
| AAAATTAATCATGGAAAATAG | 1 | 3.09893e-06 |
| AAAATTAATCCAGGAAAATCA | 1 | 3.09893e-06 |
| AAAATTAATCTACTCATCATA | 1 | 3.09893e-06 |
| AAAATTAATGTAATTTGTAAA | 1 | 3.09893e-06 |
| AAAATTAATTATGATATCCTA | 1 | 3.09893e-06 |
| AAAATTAATTGTTTGTTTTTA | 1 | 3.09893e-06 |
| AAAATTAATTTAATGGTGGTA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.