These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTATATATTCATATATA | 1 | 3.09893e-06 |
| AAAATTATATATTTATTAATA | 1 | 3.09893e-06 |
| AAAATTATATCATGTTTAAAA | 1 | 3.09893e-06 |
| AAAATTATATGATCAATTGAA | 1 | 3.09893e-06 |
| AAAATTATATTACACCCCTAA | 1 | 3.09893e-06 |
| AAAATTATATTATCCAACGGA | 1 | 3.09893e-06 |
| AAAATTATATTCGATTAGGAA | 1 | 3.09893e-06 |
| AAAATTATATTTAATAATTCA | 1 | 3.09893e-06 |
| AAAATTATATTTCGAACAAAA | 1 | 3.09893e-06 |
| AAAATTATATTTCTATTATGA | 1 | 3.09893e-06 |
| AAAATTATATTTTATATGTGA | 1 | 3.09893e-06 |
| AAAATTATATTTTGAATTATA | 1 | 3.09893e-06 |
| AAAATTATCAAACTGTTGTAA | 1 | 3.09893e-06 |
| AAAATTATCATAACGAAAAAA | 1 | 3.09893e-06 |
| AAAATTATCATGGAAACTTAA | 1 | 3.09893e-06 |
| AAAATTATCATTACGAAAATA | 1 | 3.09893e-06 |
| AAAATTATCGAATCAGCTCCA | 1 | 3.09893e-06 |
| AAAATTATCGCTTTCCATTGA | 1 | 3.09893e-06 |
| AAAATTATCTATGAATCTATA | 1 | 3.09893e-06 |
| AAAATTATCTTACTTAGGCCA | 1 | 3.09893e-06 |
| AAAATTATCTTGTACAGTAAA | 1 | 3.09893e-06 |
| AAAATTATCTTTGATATCAAA | 1 | 3.09893e-06 |
| AAAATTATGAAATTAATATGA | 1 | 3.09893e-06 |
| AAAATTATGATTATCTATTCA | 1 | 3.09893e-06 |
| AAAATTATGCTTCCACTTTAA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.