These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAACTATAATAGTAGGACCAA | 1 | 3.09893e-06 |
| AAACTATAATAGTTCTATATA | 1 | 3.09893e-06 |
| AAACTATAATCTTATCATAAA | 1 | 3.09893e-06 |
| AAACTATACACGCTTCAATCA | 1 | 3.09893e-06 |
| AAACTATACCTCTAATCTATA | 1 | 3.09893e-06 |
| AAACTATACTGACTCGCGGGA | 1 | 3.09893e-06 |
| AAACTATAGGGATCGTATCTA | 1 | 3.09893e-06 |
| AAACTATAGTAACAATTATTA | 1 | 3.09893e-06 |
| AAACTATAGTCGAATTGTCAG | 1 | 3.09893e-06 |
| AAACTATATCATATATTCATA | 1 | 3.09893e-06 |
| AAACTATATCCAACATACTTA | 1 | 3.09893e-06 |
| AAACTATATGAACTTGGCAAA | 1 | 3.09893e-06 |
| AAACTATATGGTCTTTTGATA | 1 | 3.09893e-06 |
| AAACTATATTAACTATTTATA | 1 | 3.09893e-06 |
| AAACTATATTCTGTCTCATGA | 1 | 3.09893e-06 |
| AAACTATATTTATCTATCCCA | 1 | 3.09893e-06 |
| AAACTATATTTCATAAATTGA | 1 | 3.09893e-06 |
| AAACTATATTTCTATGTTAGA | 2 | 6.19786e-06 |
| AAACTATCACCTTACTCTTCA | 1 | 3.09893e-06 |
| AAACTATCAGTGGTTTTATTA | 1 | 3.09893e-06 |
| AAACTATCAGTGTGAAGTGGA | 1 | 3.09893e-06 |
| AAACTATCATTGAAAACCGTA | 1 | 3.09893e-06 |
| AAACTATCCTAAGTACATGTA | 1 | 3.09893e-06 |
| AAACTATCCTGGTGTTCTAAA | 1 | 3.09893e-06 |
| AAACTATCTAAATTGTTATTA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.