These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAACTCTTCATTACTTTTAAA | 2 | 6.19786e-06 |
| AAACTCTTCTTAAAATGAGCA | 1 | 3.09893e-06 |
| AAACTCTTTATATAGTTTATA | 1 | 3.09893e-06 |
| AAACTGAAATATCATTAGAAG | 1 | 3.09893e-06 |
| AAACTGAACTCCTCTCTGACA | 1 | 3.09893e-06 |
| AAACTGAAGATGGGTGCTTAA | 1 | 3.09893e-06 |
| AAACTGAATATTTGTTATATA | 1 | 3.09893e-06 |
| AAACTGAATTGTAGCCCTTCA | 1 | 3.09893e-06 |
| AAACTGACAGTCAGAATTAAA | 1 | 3.09893e-06 |
| AAACTGACATCTAATACGATA | 1 | 3.09893e-06 |
| AAACTGACCCCCCACCCAGAA | 1 | 3.09893e-06 |
| AAACTGACGATTGGATAAATA | 1 | 3.09893e-06 |
| AAACTGACTCCTTCATGACTA | 1 | 3.09893e-06 |
| AAACTGACTGTCCATTTTTTA | 1 | 3.09893e-06 |
| AAACTGAGACATTAATCGAAA | 1 | 3.09893e-06 |
| AAACTGAGATAAATGAGATGA | 1 | 3.09893e-06 |
| AAACTGAGATTGAATCCTAAA | 1 | 3.09893e-06 |
| AAACTGAGGATTCACCAAGTA | 1 | 3.09893e-06 |
| AAACTGAGTTGACAAAAGCAA | 1 | 3.09893e-06 |
| AAACTGATATGCATAAGTAAA | 1 | 3.09893e-06 |
| AAACTGATCATGGTTGAAGAA | 1 | 3.09893e-06 |
| AAACTGATCATGTATGGGTCA | 1 | 3.09893e-06 |
| AAACTGATCCTGGAGTAATTA | 1 | 3.09893e-06 |
| AAACTGATGAGAGCAACGTAA | 1 | 3.09893e-06 |
| AAACTGATGTCGAGATTAAGA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.