These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAATATATATACAGATATA | 1 | 3.09893e-06 |
| AAAAATATATATACTAATGAA | 1 | 3.09893e-06 |
| AAAAATATATATTTATTATTA | 1 | 3.09893e-06 |
| AAAAATATATATTTTATATTA | 1 | 3.09893e-06 |
| AAAAATATATATTTTGTTATA | 1 | 3.09893e-06 |
| AAAAATATATCGATTTAATCA | 1 | 3.09893e-06 |
| AAAAATATATCGGAGATGTAA | 1 | 3.09893e-06 |
| AAAAATATATCTTTGTATTTA | 1 | 3.09893e-06 |
| AAAAATATATTATTATTCTTA | 1 | 3.09893e-06 |
| AAAAATATATTCTATCTTGAA | 1 | 3.09893e-06 |
| AAAAATATATTTAGGCGTCAA | 1 | 3.09893e-06 |
| AAAAATATATTTATGTCTAGA | 1 | 3.09893e-06 |
| AAAAATATATTTCTTCAATCA | 1 | 3.09893e-06 |
| AAAAATATATTTTTATTAATA | 1 | 3.09893e-06 |
| AAAAATATATTTTTTCATGAA | 1 | 3.09893e-06 |
| AAAAATATCAGTTTTAGAATA | 1 | 3.09893e-06 |
| AAAAATATCATACAAAATACA | 1 | 3.09893e-06 |
| AAAAATATCTCATATGTACAA | 1 | 3.09893e-06 |
| AAAAATATCTTCTTAGTCTCA | 1 | 3.09893e-06 |
| AAAAATATGACTAAATATGCA | 1 | 3.09893e-06 |
| AAAAATATGATAAGATACATA | 1 | 3.09893e-06 |
| AAAAATATGATAATTCAAAAA | 1 | 3.09893e-06 |
| AAAAATATGATATTTCTGATA | 1 | 3.09893e-06 |
| AAAAATATGGTACCCTTGATA | 1 | 3.09893e-06 |
| AAAAATATGTACATAAAAAAA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.