These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130404
RV31_s
- Reads
- 322,692
- Distinct strings in file
- 319,175
- File size
- 2.0 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130404
- Sample:
- SAMEA13317640
- SHA-256
- 471fae8f39eac096d75d84cc349e8eb967b6450fda8cefe7f19585b307cb72fe
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAATGTTCGGTTGGACACA | 1 | 3.09893e-06 |
| AAAAATGTTCTTGGCTTTTTA | 2 | 6.19786e-06 |
| AAAAATGTTTAACTTCAATAA | 1 | 3.09893e-06 |
| AAAAATGTTTAATAACACATA | 1 | 3.09893e-06 |
| AAAAATGTTTATTTTTTATCA | 1 | 3.09893e-06 |
| AAAAATTAAAAATTATATACA | 1 | 3.09893e-06 |
| AAAAATTAAAAGTAGCATGAA | 1 | 3.09893e-06 |
| AAAAATTAAATATATATGTTA | 1 | 3.09893e-06 |
| AAAAATTAAATATCAATCTTA | 1 | 3.09893e-06 |
| AAAAATTAAGATAAAATATGA | 1 | 3.09893e-06 |
| AAAAATTAAGTTTCATATCTT | 1 | 3.09893e-06 |
| AAAAATTAATAAATTTATATA | 1 | 3.09893e-06 |
| AAAAATTAATAACTGCAGAAA | 1 | 3.09893e-06 |
| AAAAATTAATACATTGATGAA | 1 | 3.09893e-06 |
| AAAAATTAATATCTTTTTATA | 1 | 3.09893e-06 |
| AAAAATTAATCGTCACCATAA | 1 | 3.09893e-06 |
| AAAAATTAATCTAATATCATA | 1 | 3.09893e-06 |
| AAAAATTAATCTACTGTTCAA | 1 | 3.09893e-06 |
| AAAAATTAATTATTAATGTCA | 1 | 3.09893e-06 |
| AAAAATTAATTTTAATCAAAA | 1 | 3.09893e-06 |
| AAAAATTAATTTTTCATAATA | 5 | 1.54947e-05 |
| AAAAATTACAGGATCGTTTTA | 1 | 3.09893e-06 |
| AAAAATTACATGTCTTTAATA | 1 | 3.09893e-06 |
| AAAAATTACTAAGTGATAGAA | 1 | 3.09893e-06 |
| AAAAATTAGAATAGGAGTAAA | 1 | 3.09893e-06 |
Read fractions use all reads in this source file as the denominator.