These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAATAGACCTTCATAAAA | 1 | 3.70204e-06 |
| AAAAAATAGATTGGTTTATTA | 1 | 3.70204e-06 |
| AAAAAATAGCTGTGGTTAGGA | 1 | 3.70204e-06 |
| AAAAAATATAAAATGCTGATA | 1 | 3.70204e-06 |
| AAAAAATATATACGATTTATA | 1 | 3.70204e-06 |
| AAAAAATATATATGAAAAATA | 1 | 3.70204e-06 |
| AAAAAATATATATTTATTATA | 1 | 3.70204e-06 |
| AAAAAATATATTTATTATATA | 1 | 3.70204e-06 |
| AAAAAATATATTTTTCATAGA | 1 | 3.70204e-06 |
| AAAAAATATCATTCTACCTGA | 1 | 3.70204e-06 |
| AAAAAATATCCATGTTTAAGA | 1 | 3.70204e-06 |
| AAAAAATATCTCGTGTGCGTA | 1 | 3.70204e-06 |
| AAAAAATATGAACTTCATTTA | 1 | 3.70204e-06 |
| AAAAAATATGAATGTCACTAA | 1 | 3.70204e-06 |
| AAAAAATATGACACTTATCGA | 1 | 3.70204e-06 |
| AAAAAATATGCTTAATTAGTA | 1 | 3.70204e-06 |
| AAAAAATATGTTTTAGTATAA | 1 | 3.70204e-06 |
| AAAAAATATTATTTATGCCCA | 1 | 3.70204e-06 |
| AAAAAATATTCGTTTGGTTTA | 1 | 3.70204e-06 |
| AAAAAATATTCTCGATTTGTA | 1 | 3.70204e-06 |
| AAAAAATATTCTGTATTCATA | 1 | 3.70204e-06 |
| AAAAAATATTGAATGCAAAGA | 1 | 3.70204e-06 |
| AAAAAATATTTGAATAATATA | 1 | 3.70204e-06 |
| AAAAAATATTTTAATTTTATA | 1 | 3.70204e-06 |
| AAAAAATCAATATAATACTCA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.