These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAGGTCAGCATTCCTAACA | 1 | 3.70204e-06 |
| AAAAGGTCATGACCACTTTAA | 1 | 3.70204e-06 |
| AAAAGGTCATTATGTGTGATA | 2 | 7.40409e-06 |
| AAAAGGTCCCTAAATATCCAA | 1 | 3.70204e-06 |
| AAAAGGTCTCCTAGTTCGATA | 1 | 3.70204e-06 |
| AAAAGGTCTTAGCTTTGATGA | 1 | 3.70204e-06 |
| AAAAGGTGACATGGTAGCTCA | 1 | 3.70204e-06 |
| AAAAGGTGCATGATAAACCGA | 1 | 3.70204e-06 |
| AAAAGGTGGAAGTAGACGGTA | 1 | 3.70204e-06 |
| AAAAGGTGGGGGGGGGGTGAG | 1 | 3.70204e-06 |
| AAAAGGTGTATTTACTTAACA | 1 | 3.70204e-06 |
| AAAAGGTGTCTTAATAATAAA | 1 | 3.70204e-06 |
| AAAAGGTTTTATAAAGTATAA | 1 | 3.70204e-06 |
| AAAAGTAAAAGTCATCTAATA | 1 | 3.70204e-06 |
| AAAAGTAAATCTCATAGGATA | 1 | 3.70204e-06 |
| AAAAGTAACCGAAAATCGATA | 1 | 3.70204e-06 |
| AAAAGTAAGTCATTTGATGGA | 1 | 3.70204e-06 |
| AAAAGTAATCGTACATTGAAA | 1 | 3.70204e-06 |
| AAAAGTAATTACCACTTCCAA | 1 | 3.70204e-06 |
| AAAAGTAATTATTAAATTGGA | 1 | 3.70204e-06 |
| AAAAGTAATTTTTAGGATTAA | 1 | 3.70204e-06 |
| AAAAGTACATCAAGTAAGCAA | 1 | 3.70204e-06 |
| AAAAGTACTTTTCCTAGATTA | 1 | 3.70204e-06 |
| AAAAGTAGACTATAGCAGTAA | 1 | 3.70204e-06 |
| AAAAGTAGCACTATCAAGAAA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.