These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATAATATAATATTATTAA | 1 | 3.70204e-06 |
| AAAATAATATCAGTAAACTAA | 1 | 3.70204e-06 |
| AAAATAATATCTGATATGATA | 1 | 3.70204e-06 |
| AAAATAATATTATTTTATATA | 1 | 3.70204e-06 |
| AAAATAATATTTAATAACGCA | 1 | 3.70204e-06 |
| AAAATAATATTTAATATTAAA | 1 | 3.70204e-06 |
| AAAATAATATTTCATAACTAA | 1 | 3.70204e-06 |
| AAAATAATATTTCATAACTCA | 1 | 3.70204e-06 |
| AAAATAATATTTCATAAGACA | 1 | 3.70204e-06 |
| AAAATAATATTTGTTATTATA | 1 | 3.70204e-06 |
| AAAATAATATTTTCTTTTGCA | 1 | 3.70204e-06 |
| AAAATAATATTTTTTATTAAA | 3 | 1.11061e-05 |
| AAAATAATCAATAACTAAAAA | 1 | 3.70204e-06 |
| AAAATAATCAATGTATAACGA | 1 | 3.70204e-06 |
| AAAATAATCACCTTTCTGGTA | 1 | 3.70204e-06 |
| AAAATAATCATACGTGACAGA | 1 | 3.70204e-06 |
| AAAATAATCATCTCGGGTTTA | 1 | 3.70204e-06 |
| AAAATAATCATTTTGCGATTA | 1 | 3.70204e-06 |
| AAAATAATCCCACATGAGTGA | 1 | 3.70204e-06 |
| AAAATAATCCTCTCAAAGGTA | 1 | 3.70204e-06 |
| AAAATAATCTAGACTCTGCTA | 1 | 3.70204e-06 |
| AAAATAATCTGATAATAGTAA | 1 | 3.70204e-06 |
| AAAATAATCTGTATTATATCA | 1 | 3.70204e-06 |
| AAAATAATCTTTTTTAAATAA | 1 | 3.70204e-06 |
| AAAATAATGCCTTTTACATTA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.