These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATCATCTGTAAATCTATA | 1 | 3.70204e-06 |
| AAAATCATCTTTTATCTAAAA | 1 | 3.70204e-06 |
| AAAATCATGATAATGTAATAA | 1 | 3.70204e-06 |
| AAAATCATGATCGAGTAACCA | 1 | 3.70204e-06 |
| AAAATCATGCGGGGGTATATA | 1 | 3.70204e-06 |
| AAAATCATGCTCTCTATTCCA | 1 | 3.70204e-06 |
| AAAATCATTATAAGCAGGCTA | 1 | 3.70204e-06 |
| AAAATCATTATTTTACATTTA | 1 | 3.70204e-06 |
| AAAATCATTCAACTTTATTAA | 1 | 3.70204e-06 |
| AAAATCATTTATCAAGATATA | 1 | 3.70204e-06 |
| AAAATCATTTCTTCTATGCTA | 1 | 3.70204e-06 |
| AAAATCATTTTTAGTTTCATA | 1 | 3.70204e-06 |
| AAAATCATTTTTTGTTTAGGA | 1 | 3.70204e-06 |
| AAAATCCAAACTATATTAATA | 1 | 3.70204e-06 |
| AAAATCCAACTTGCGGAATAA | 1 | 3.70204e-06 |
| AAAATCCAATCCTTGGCAATA | 1 | 3.70204e-06 |
| AAAATCCACACAATCTAATCA | 1 | 3.70204e-06 |
| AAAATCCACTAGGGTACTTCA | 1 | 3.70204e-06 |
| AAAATCCATAAGGTTATGATA | 1 | 3.70204e-06 |
| AAAATCCATCTGAGCCTGAGA | 1 | 3.70204e-06 |
| AAAATCCATGGTCGTGAGTGA | 1 | 3.70204e-06 |
| AAAATCCCAAACCGATATTTA | 1 | 3.70204e-06 |
| AAAATCCCAACAGCTTAGAAA | 1 | 3.70204e-06 |
| AAAATCCCCCGTATAACATCA | 1 | 3.70204e-06 |
| AAAATCCCGAGCTACTTACGA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.