These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAATTCTATATTTTTCTATA | 1 | 3.70204e-06 |
| AAAATTCTCACTAGTTTCTAA | 1 | 3.70204e-06 |
| AAAATTCTCACTTAAGTTTCA | 1 | 3.70204e-06 |
| AAAATTCTCGGCATCATCCTA | 1 | 3.70204e-06 |
| AAAATTCTCTATGTGGTGTAA | 1 | 3.70204e-06 |
| AAAATTCTGGGGATGAGTAAA | 1 | 3.70204e-06 |
| AAAATTCTGTATGTTATATTA | 1 | 3.70204e-06 |
| AAAATTCTGTGTTACTTGTTA | 1 | 3.70204e-06 |
| AAAATTCTGTTTCAAAATATA | 1 | 3.70204e-06 |
| AAAATTCTTAAAACCTATTTA | 1 | 3.70204e-06 |
| AAAATTCTTAAAATTCGGAAA | 1 | 3.70204e-06 |
| AAAATTCTTAATAGCTAGGGA | 1 | 3.70204e-06 |
| AAAATTCTTATTATTTACAAA | 1 | 3.70204e-06 |
| AAAATTCTTCAATGAATCAGA | 1 | 3.70204e-06 |
| AAAATTCTTGGAGATCACGCA | 1 | 3.70204e-06 |
| AAAATTCTTGGATTATTCATA | 1 | 3.70204e-06 |
| AAAATTCTTGTCTCCTTATTA | 1 | 3.70204e-06 |
| AAAATTCTTGTTCACATAATA | 1 | 3.70204e-06 |
| AAAATTCTTTATATCATAATA | 1 | 3.70204e-06 |
| AAAATTGAAAAGTCTAAGAGA | 1 | 3.70204e-06 |
| AAAATTGAAAGGCAGAGGGAA | 1 | 3.70204e-06 |
| AAAATTGAACAATCCCTTTAA | 1 | 3.70204e-06 |
| AAAATTGACATATGTAATGTA | 1 | 3.70204e-06 |
| AAAATTGAGTAATAGGTCTCA | 1 | 3.70204e-06 |
| AAAATTGATAATTAATATATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.