These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAAAATCTTGTTAGCATAA | 1 | 3.70204e-06 |
| AAAAAAATGAAGTTAAATAAA | 1 | 3.70204e-06 |
| AAAAAAATGGTATTCAACATA | 1 | 3.70204e-06 |
| AAAAAAATGTACGCTTCAGAA | 1 | 3.70204e-06 |
| AAAAAAATGTATTTATTAAAA | 2 | 7.40409e-06 |
| AAAAAAATTAATATTTGCTCA | 1 | 3.70204e-06 |
| AAAAAAATTAGATTGAATAGA | 1 | 3.70204e-06 |
| AAAAAAATTGACTTGTTATTA | 1 | 3.70204e-06 |
| AAAAAAATTGATACGCAGTGA | 1 | 3.70204e-06 |
| AAAAAAATTGCATTCTCAGAA | 1 | 3.70204e-06 |
| AAAAAAATTTAGAAAATCATA | 1 | 3.70204e-06 |
| AAAAAAATTTATCGGGGTGTA | 1 | 3.70204e-06 |
| AAAAAAATTTTACAAGTTCGA | 1 | 3.70204e-06 |
| AAAAAAATTTTTAATATCCAA | 1 | 3.70204e-06 |
| AAAAAACAACACCCTAACGAA | 1 | 3.70204e-06 |
| AAAAAACAACTCTTGCGTTAA | 1 | 3.70204e-06 |
| AAAAAACACTTAGTTACTAAA | 1 | 3.70204e-06 |
| AAAAAACACTTCTGTTATCTA | 1 | 3.70204e-06 |
| AAAAAACATAAATAATAAGTA | 1 | 3.70204e-06 |
| AAAAAACATAGCTAAAAGCTA | 1 | 3.70204e-06 |
| AAAAAACATATTTCTATATAA | 1 | 3.70204e-06 |
| AAAAAACATTAATTATAAATA | 1 | 3.70204e-06 |
| AAAAAACCCCTCGCAGGTAAA | 1 | 3.70204e-06 |
| AAAAAACCCTACACTCCTAAA | 1 | 3.70204e-06 |
| AAAAAACCCTCATTTATCAGA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.