These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGATGCGTGTTTACTGTAA | 1 | 3.70204e-06 |
| AAAGATGCTGCTAGTAGGATA | 1 | 3.70204e-06 |
| AAAGATGGAGAAAATTTCTTA | 1 | 3.70204e-06 |
| AAAGATGGCAAAAAGTAGTCA | 1 | 3.70204e-06 |
| AAAGATGGTAAGTTAGTGAAA | 1 | 3.70204e-06 |
| AAAGATGTAAATCATATCTAA | 1 | 3.70204e-06 |
| AAAGATGTCCTATGTGTAACA | 1 | 3.70204e-06 |
| AAAGATGTCTCTTGCATTCTA | 1 | 3.70204e-06 |
| AAAGATGTGCTTATGGTTTTA | 1 | 3.70204e-06 |
| AAAGATGTGGCATTTGCCGGA | 1 | 3.70204e-06 |
| AAAGATGTGTGTGAACAGACA | 1 | 3.70204e-06 |
| AAAGATGTTAATTATTGTTTA | 1 | 3.70204e-06 |
| AAAGATGTTATAGGATGTACA | 1 | 3.70204e-06 |
| AAAGATGTTCCTTACTTTAAA | 1 | 3.70204e-06 |
| AAAGATTAAAAAAGATAAGGA | 1 | 3.70204e-06 |
| AAAGATTAAAGAGACAGTATA | 1 | 3.70204e-06 |
| AAAGATTAACCTACAATGTAA | 1 | 3.70204e-06 |
| AAAGATTAAGTATGGAATGAA | 1 | 3.70204e-06 |
| AAAGATTAATACTTTCCCGCA | 1 | 3.70204e-06 |
| AAAGATTAATTATATAGATTA | 1 | 3.70204e-06 |
| AAAGATTACGATGAAACTGAA | 1 | 3.70204e-06 |
| AAAGATTACTCCAGTCGAATA | 2 | 7.40409e-06 |
| AAAGATTATAATGGCATTGGA | 1 | 3.70204e-06 |
| AAAGATTATCAGGGGTGAAAA | 1 | 3.70204e-06 |
| AAAGATTATCGAACGTTACTA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.