These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGCGTGTCCGACTGACTTA | 1 | 3.70204e-06 |
| AAAGCGTTACTCTTTCATAAA | 1 | 3.70204e-06 |
| AAAGCGTTAGAAGGACAGGTA | 1 | 3.70204e-06 |
| AAAGCGTTAGTAGATCAGAGA | 1 | 3.70204e-06 |
| AAAGCGTTGCTCCTTGAGTAA | 1 | 3.70204e-06 |
| AAAGCGTTGTCGAGAATATTA | 1 | 3.70204e-06 |
| AAAGCTAACTTATTCGGAAAA | 1 | 3.70204e-06 |
| AAAGCTAATAAATATATAATA | 1 | 3.70204e-06 |
| AAAGCTAATATTCCTATCGAA | 1 | 3.70204e-06 |
| AAAGCTAATTGATATGATGGA | 1 | 3.70204e-06 |
| AAAGCTACATGATCATATTCA | 1 | 3.70204e-06 |
| AAAGCTACATTTAGATTAAAA | 1 | 3.70204e-06 |
| AAAGCTACCAATATTCGAAAA | 1 | 3.70204e-06 |
| AAAGCTAGGAGTGCTGGTTAA | 1 | 3.70204e-06 |
| AAAGCTAGTAGATACACAATA | 1 | 3.70204e-06 |
| AAAGCTAGTTGTTGTTCCCTA | 1 | 3.70204e-06 |
| AAAGCTATAATATTTTTCGAA | 1 | 3.70204e-06 |
| AAAGCTATAGTTCGTTACATA | 1 | 3.70204e-06 |
| AAAGCTATATATGGAGATATA | 1 | 3.70204e-06 |
| AAAGCTATCACTCTTAGAAGA | 1 | 3.70204e-06 |
| AAAGCTATCTATTAATAACCA | 1 | 3.70204e-06 |
| AAAGCTATGCACTCGTTAATA | 1 | 3.70204e-06 |
| AAAGCTATGCGTATTAAGATA | 1 | 3.70204e-06 |
| AAAGCTATGGGTTAAGTTATA | 1 | 3.70204e-06 |
| AAAGCTATTCAAAGATTGAGA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.