These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGGGGAACCTAACTCTCAA | 1 | 3.70204e-06 |
| AAAGGGGACAGGTATGGAATA | 1 | 3.70204e-06 |
| AAAGGGGAGAGGTCAATGTGA | 1 | 3.70204e-06 |
| AAAGGGGAGCTCGAGTGGGGA | 1 | 3.70204e-06 |
| AAAGGGGAGTTCAGGGTTGCA | 1 | 3.70204e-06 |
| AAAGGGGATACAGTTTCGCTA | 1 | 3.70204e-06 |
| AAAGGGGCTCGGGGGGCTGTA | 1 | 3.70204e-06 |
| AAAGGGGGACATTACTTAATA | 1 | 3.70204e-06 |
| AAAGGGGGGAGTATACGTTAA | 1 | 3.70204e-06 |
| AAAGGGGGGTAGACCCGGGGA | 1 | 3.70204e-06 |
| AAAGGGGTCATTCTGTCTGGA | 1 | 3.70204e-06 |
| AAAGGGGTTAGGTAGGCTCTA | 1 | 3.70204e-06 |
| AAAGGGTAAAAAAATGAAATA | 1 | 3.70204e-06 |
| AAAGGGTAAAACTTCCTGTGA | 1 | 3.70204e-06 |
| AAAGGGTACAACTTTCAAATA | 1 | 3.70204e-06 |
| AAAGGGTATAATTAGCTTATA | 1 | 3.70204e-06 |
| AAAGGGTCAAGCTTTATCCAA | 1 | 3.70204e-06 |
| AAAGGGTCGTCACTGAGAGGA | 1 | 3.70204e-06 |
| AAAGGGTCTATACTATTCTTA | 1 | 3.70204e-06 |
| AAAGGGTCTGGTACAATTAAA | 1 | 3.70204e-06 |
| AAAGGGTGGATGATGTGATGA | 1 | 3.70204e-06 |
| AAAGGGTTATAGTTATTGGTA | 1 | 3.70204e-06 |
| AAAGGGTTCAATGTTACTCCA | 1 | 3.70204e-06 |
| AAAGGGTTCGAGTCCATATTA | 1 | 3.70204e-06 |
| AAAGGGTTTCGCTAAACTCCA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.