These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAGTATTATCGTTCTCGTGA | 1 | 3.70204e-06 |
| AAAGTATTATTGAAGTTAAAA | 1 | 3.70204e-06 |
| AAAGTATTCACATATTTATAA | 1 | 3.70204e-06 |
| AAAGTATTCGACCTATTTTTA | 1 | 3.70204e-06 |
| AAAGTATTCTATATGTGAGCA | 1 | 3.70204e-06 |
| AAAGTATTCTCATCTCACTTA | 1 | 3.70204e-06 |
| AAAGTATTGAGTATAGCAACA | 1 | 3.70204e-06 |
| AAAGTATTGATAATGTCGTCA | 1 | 3.70204e-06 |
| AAAGTATTGGAACTATATATA | 1 | 3.70204e-06 |
| AAAGTATTGGATGCATGAATA | 1 | 3.70204e-06 |
| AAAGTATTTACGGATCTGTGA | 1 | 3.70204e-06 |
| AAAGTATTTACTAATTTCCAA | 1 | 3.70204e-06 |
| AAAGTATTTATGATTTTACTA | 2 | 7.40409e-06 |
| AAAGTATTTTATTTGTATGTA | 1 | 3.70204e-06 |
| AAAGTCAAACTGTTTCAACCA | 1 | 3.70204e-06 |
| AAAGTCAACTGTATATATATA | 1 | 3.70204e-06 |
| AAAGTCAAGTTTGGTTATGTA | 1 | 3.70204e-06 |
| AAAGTCAATCACCAGTGGAAA | 1 | 3.70204e-06 |
| AAAGTCAATTCGCAGATGAAA | 1 | 3.70204e-06 |
| AAAGTCAATTTATTAAGTAAA | 1 | 3.70204e-06 |
| AAAGTCAGTGGTTGATGGTAA | 1 | 3.70204e-06 |
| AAAGTCATAATATTTTATATA | 1 | 3.70204e-06 |
| AAAGTCATAATCTCTAAGAAA | 1 | 3.70204e-06 |
| AAAGTCATATATGTATAGAGA | 1 | 3.70204e-06 |
| AAAGTCATATCAACGATAATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.