These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAATATATCGCGTATCACA | 1 | 3.70204e-06 |
| AAAAATATATCTAGACATATA | 1 | 3.70204e-06 |
| AAAAATATATTAGTTATGTAA | 1 | 3.70204e-06 |
| AAAAATATATTATCTTTATCA | 1 | 3.70204e-06 |
| AAAAATATATTCTAGTAATAA | 1 | 3.70204e-06 |
| AAAAATATATTGCATCCATGA | 1 | 3.70204e-06 |
| AAAAATATATTTAATAATTCA | 1 | 3.70204e-06 |
| AAAAATATATTTAGTTTTATA | 1 | 3.70204e-06 |
| AAAAATATATTTCTCGTTATA | 1 | 3.70204e-06 |
| AAAAATATATTTTCCCCCAAA | 1 | 3.70204e-06 |
| AAAAATATCAACACGTATTAA | 1 | 3.70204e-06 |
| AAAAATATCAATAAAAATATA | 1 | 3.70204e-06 |
| AAAAATATCATGGGGTTACAA | 1 | 3.70204e-06 |
| AAAAATATCCTGCAGATGAGA | 1 | 3.70204e-06 |
| AAAAATATCTAACGCAAATGA | 1 | 3.70204e-06 |
| AAAAATATCTTGCCTTACTCA | 1 | 3.70204e-06 |
| AAAAATATGATTATGATTTTA | 1 | 3.70204e-06 |
| AAAAATATGTAATACAATAAA | 1 | 3.70204e-06 |
| AAAAATATGTGTATTAATAGA | 1 | 3.70204e-06 |
| AAAAATATGTTTTTTGATCCA | 1 | 3.70204e-06 |
| AAAAATATTAATAAAAAAATA | 1 | 3.70204e-06 |
| AAAAATATTAATAAAAATATA | 1 | 3.70204e-06 |
| AAAAATATTAATTTTTAATAA | 1 | 3.70204e-06 |
| AAAAATATTACAGTTAACATA | 1 | 3.70204e-06 |
| AAAAATATTAGGCCATAATAA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.