These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATAATGTTACACAAATACA | 1 | 3.70204e-06 |
| AAATAATGTTTCTTATCTCTA | 1 | 3.70204e-06 |
| AAATAATTAAAACCTCATTAA | 1 | 3.70204e-06 |
| AAATAATTAAATTTGCTTCAA | 1 | 3.70204e-06 |
| AAATAATTAACTTAACATTAA | 1 | 3.70204e-06 |
| AAATAATTAAGTGATAGCTTA | 2 | 7.40409e-06 |
| AAATAATTAATATTTATCACA | 2 | 7.40409e-06 |
| AAATAATTACAAAAATATTAA | 1 | 3.70204e-06 |
| AAATAATTACTCTAAGTAACA | 1 | 3.70204e-06 |
| AAATAATTAGAATTATTAATA | 1 | 3.70204e-06 |
| AAATAATTAGCCATTCTATAA | 1 | 3.70204e-06 |
| AAATAATTATAATTCGTAAAA | 1 | 3.70204e-06 |
| AAATAATTATATTAATTAATA | 1 | 3.70204e-06 |
| AAATAATTATCCCATGGTATA | 1 | 3.70204e-06 |
| AAATAATTATGATAAAAATTA | 1 | 3.70204e-06 |
| AAATAATTATGATATTATATA | 1 | 3.70204e-06 |
| AAATAATTATGGGTACTCGGA | 1 | 3.70204e-06 |
| AAATAATTATTGTTATAATTA | 1 | 3.70204e-06 |
| AAATAATTCACCTCTTATTAA | 1 | 3.70204e-06 |
| AAATAATTCACCTTGTATAAA | 1 | 3.70204e-06 |
| AAATAATTCAGATCAACAAAA | 1 | 3.70204e-06 |
| AAATAATTCCTATTTAAATAA | 1 | 3.70204e-06 |
| AAATAATTCGTTTTGTGTTTA | 1 | 3.70204e-06 |
| AAATAATTCTAGATCTGTGTA | 1 | 3.70204e-06 |
| AAATAATTCTGGGTGCATCTA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.