These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAATACATATTTGCAAGATAA | 1 | 3.70204e-06 |
| AAATACATATTTGCATATTCA | 1 | 3.70204e-06 |
| AAATACATCAGATCCTAAAGA | 1 | 3.70204e-06 |
| AAATACATCATAGTAAGCAAA | 1 | 3.70204e-06 |
| AAATACATGACGTATATGTAA | 1 | 3.70204e-06 |
| AAATACATGGCCTCAACGTAA | 1 | 3.70204e-06 |
| AAATACATTCAGCATCTTTAA | 1 | 3.70204e-06 |
| AAATACCAAGGTATTATTATA | 1 | 3.70204e-06 |
| AAATACCAAGTTTCGAGTATA | 1 | 3.70204e-06 |
| AAATACCAATTATCTAGGAAA | 1 | 3.70204e-06 |
| AAATACCATATATAAATCATA | 1 | 3.70204e-06 |
| AAATACCATTATTAATATACA | 1 | 3.70204e-06 |
| AAATACCCGCTCTGTTAGTTA | 1 | 3.70204e-06 |
| AAATACCCTAACGTATGGCCA | 1 | 3.70204e-06 |
| AAATACCCTTTCATGACACAA | 1 | 3.70204e-06 |
| AAATACCGATTATCGTTTATA | 1 | 3.70204e-06 |
| AAATACCGCATCGTATTACCA | 1 | 3.70204e-06 |
| AAATACCGCTTTACTACCAGA | 1 | 3.70204e-06 |
| AAATACCTAAACCTCGGTGTA | 1 | 3.70204e-06 |
| AAATACCTAAACTTTGTTATA | 2 | 7.40409e-06 |
| AAATACCTAACATCGGAATGA | 1 | 3.70204e-06 |
| AAATACCTAATTTTAAATATA | 1 | 3.70204e-06 |
| AAATACCTAGCAATTCAATGA | 1 | 3.70204e-06 |
| AAATACCTATCAGGTAATGAA | 1 | 3.70204e-06 |
| AAATACCTATTTCTGAGATCA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.