These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAAATGTCATAGTTTAGAAA | 1 | 3.70204e-06 |
| AAAAATGTCCTATGTCTGGAA | 1 | 3.70204e-06 |
| AAAAATGTGTATAATATTTCA | 1 | 3.70204e-06 |
| AAAAATGTTATCCGAACAAAA | 1 | 3.70204e-06 |
| AAAAATGTTGAGTTAAATTCA | 1 | 3.70204e-06 |
| AAAAATTAAAAAGCTGAACAA | 1 | 3.70204e-06 |
| AAAAATTAAATATAATATCGA | 1 | 3.70204e-06 |
| AAAAATTAAATCAGAGCTTCA | 1 | 3.70204e-06 |
| AAAAATTAAATGAAAAATACA | 1 | 3.70204e-06 |
| AAAAATTAAATGCAAATATCA | 1 | 3.70204e-06 |
| AAAAATTAACTTTACAGATTA | 1 | 3.70204e-06 |
| AAAAATTAATAATTAAAATAA | 1 | 3.70204e-06 |
| AAAAATTAATTTACAGCCTAA | 1 | 3.70204e-06 |
| AAAAATTAATTTTCATAAAAA | 1 | 3.70204e-06 |
| AAAAATTAATTTTTAATAACA | 3 | 1.11061e-05 |
| AAAAATTAATTTTTCATAATA | 1 | 3.70204e-06 |
| AAAAATTACAGATTTTATAAA | 1 | 3.70204e-06 |
| AAAAATTACTATGGTACCATA | 1 | 3.70204e-06 |
| AAAAATTACTATGTAATCACA | 1 | 3.70204e-06 |
| AAAAATTACTGCATCGTAGAA | 1 | 3.70204e-06 |
| AAAAATTAGTAATTATTTCCA | 1 | 3.70204e-06 |
| AAAAATTAGTTATTTCCTTCA | 1 | 3.70204e-06 |
| AAAAATTATAACCAATGAGTA | 1 | 3.70204e-06 |
| AAAAATTATAATTTTTTATGA | 1 | 3.70204e-06 |
| AAAAATTATACTTATTATTAA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.