These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.
ERR9130406
RV33_s
- Reads
- 270,121
- Distinct strings in file
- 267,697
- File size
- 1.7 MiB
Source attribution · SHA-256
- Source project:
- PRJEB51473
- Archive record:
- ERR9130406
- Sample:
- SAMEA13317642
- SHA-256
- acb67ef1c96c4708d0602f770ee8c57734df7618fbd7284dee5122a8db21ad40
Exact read query
Queries are case-sensitive. No trimming or reverse-complement merging is applied.
| Sequence | Count | Read fraction |
|---|---|---|
| AAAACTTTTCTCTTGGGATGA | 1 | 3.70204e-06 |
| AAAACTTTTTCTAAATCAGAA | 1 | 3.70204e-06 |
| AAAACTTTTTGAAAATGTATA | 1 | 3.70204e-06 |
| AAAACTTTTTTCAAGAGCTAA | 1 | 3.70204e-06 |
| AAAACTTTTTTGCTTTTTTAA | 1 | 3.70204e-06 |
| AAAAGAAAAGTGATCATGTAA | 1 | 3.70204e-06 |
| AAAAGAAAATATTTTTACGAA | 1 | 3.70204e-06 |
| AAAAGAAATATATATTATAAA | 1 | 3.70204e-06 |
| AAAAGAAATGAATTGAGTGAA | 1 | 3.70204e-06 |
| AAAAGAACAAACTTATTACAA | 2 | 7.40409e-06 |
| AAAAGAACAAAGATTATGAAA | 1 | 3.70204e-06 |
| AAAAGAACAATAAACCCATTA | 1 | 3.70204e-06 |
| AAAAGAACACAGTGCTAAATA | 1 | 3.70204e-06 |
| AAAAGAACAGGAGTTGAACTA | 1 | 3.70204e-06 |
| AAAAGAACTATAAGAGTAACA | 1 | 3.70204e-06 |
| AAAAGAAGAATACAGTTGACA | 1 | 3.70204e-06 |
| AAAAGAAGACAGCCCGATCTA | 1 | 3.70204e-06 |
| AAAAGAAGAGTTGACGGAGAA | 1 | 3.70204e-06 |
| AAAAGAAGCAGTGTTGACGGA | 1 | 3.70204e-06 |
| AAAAGAAGCTATTGATCCTAA | 1 | 3.70204e-06 |
| AAAAGAAGTATTGAACTAATA | 1 | 3.70204e-06 |
| AAAAGAAGTTCAGATATTTTA | 1 | 3.70204e-06 |
| AAAAGAAGTTTAATATAGACA | 1 | 3.70204e-06 |
| AAAAGAATAAGACGGATTCAA | 1 | 3.70204e-06 |
| AAAAGAATCCTTTTCCCAATA | 1 | 3.70204e-06 |
Read fractions use all reads in this source file as the denominator.