P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGTAGAAGAAGCTAGA25.77019e-06
AAAAAAGTAGGTTGTCACATA12.8851e-06
AAAAAAGTATAAGAATACACA12.8851e-06
AAAAAAGTCAAAGTTGCTGAA12.8851e-06
AAAAAAGTCTGGGGAAAAGTA12.8851e-06
AAAAAAGTGATCCTGATTTGA12.8851e-06
AAAAAAGTGGATCACTTAAAA12.8851e-06
AAAAAAGTTACGTCGGAGACA25.77019e-06
AAAAAAGTTATATTATATGGA12.8851e-06
AAAAAAGTTCCGACGGGTGGA12.8851e-06
AAAAAAGTTTAACTTATAGCA12.8851e-06
AAAAAAGTTTAATATGTAAAA12.8851e-06
AAAAAATAAGAACAGAGTATA12.8851e-06
AAAAAATAATATTCGGTCTTA12.8851e-06
AAAAAATAATTGAATCCTTAA12.8851e-06
AAAAAATACACACATCAACAA12.8851e-06
AAAAAATACATATGTGTGCTA12.8851e-06
AAAAAATACATTCTGAACATA12.8851e-06
AAAAAATACTATTTTGAAATA12.8851e-06
AAAAAATACTTAAGAAATCTA12.8851e-06
AAAAAATACTTTTTAGGTTAA12.8851e-06
AAAAAATAGAACTCTCTCTGA12.8851e-06
AAAAAATAGGAGAATTTTACA12.8851e-06
AAAAAATAGGCTATATACATA12.8851e-06
AAAAAATAGTGTATGTTTTAA12.8851e-06

Read fractions use all reads in this source file as the denominator.