P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGAACTCAGTCTGACCCA12.8851e-06
AAAAGAAGAATTTATGGTAGA12.8851e-06
AAAAGAAGACTAGTAATCACA12.8851e-06
AAAAGAAGACTCACGAGCCAA12.8851e-06
AAAAGAAGGGACTTATCCAAA12.8851e-06
AAAAGAAGGGTAATCATCTCA12.8851e-06
AAAAGAAGTGTCCCTGAAAAA12.8851e-06
AAAAGAATAATAACCCAGCTA12.8851e-06
AAAAGAATAGTACTGAAGGAA12.8851e-06
AAAAGAATATAATTATATGAA12.8851e-06
AAAAGAATCATAGTTAGTGGA12.8851e-06
AAAAGAATCCCGTTCACGTCA12.8851e-06
AAAAGAATCTTTAGCAATACA12.8851e-06
AAAAGAATGCATTAGGAATGA12.8851e-06
AAAAGAATGGACTTATGCCTA12.8851e-06
AAAAGAATGTTATCTAAAACA12.8851e-06
AAAAGAATTACCTGTCACTGA12.8851e-06
AAAAGAATTGGTGAAGCTACA12.8851e-06
AAAAGACAACACTCAAATAAA25.77019e-06
AAAAGACAATCATAACATGAA12.8851e-06
AAAAGACACTATGCTAAAATA12.8851e-06
AAAAGACACTATTGCTGGATA12.8851e-06
AAAAGACAGGATGGTTGAGGA12.8851e-06
AAAAGACAGTATTAGACAGTA12.8851e-06
AAAAGACATAGCTTCTTGAAA12.8851e-06

Read fractions use all reads in this source file as the denominator.