P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTTCTTTTATTGTTAAA12.8851e-06
AAAAGTTGATTGAGTATAAGA12.8851e-06
AAAAGTTGCACGACCTATAGA12.8851e-06
AAAAGTTGCATGGACGTCTTA12.8851e-06
AAAAGTTGCTAACCATTGATA12.8851e-06
AAAAGTTGCTAAGATGTCTCA12.8851e-06
AAAAGTTGCTAAGTTGCTTCA12.8851e-06
AAAAGTTGTCTGTTAAGAGTA12.8851e-06
AAAAGTTGTTTTGTATAACTA12.8851e-06
AAAAGTTTAAAGGCGCATATA12.8851e-06
AAAAGTTTAGCATAAGTATTA12.8851e-06
AAAAGTTTATATGGATTAAAA12.8851e-06
AAAAGTTTATCATACTTATTG12.8851e-06
AAAAGTTTATTTTGTGAGGTA12.8851e-06
AAAAGTTTCCTATTTTCACTA12.8851e-06
AAAAGTTTCGATCGTCTGGGA12.8851e-06
AAAAGTTTCTCCACAATTGAA12.8851e-06
AAAAGTTTGATTTCATTAAAA12.8851e-06
AAAAGTTTGGACTAAATTATA12.8851e-06
AAAAGTTTGGCTTAAACAGAA12.8851e-06
AAAAGTTTGGTTGAAAGTTTA12.8851e-06
AAAAGTTTTAATGTTAGCTGA12.8851e-06
AAAAGTTTTAGGGTTAGGGGA12.8851e-06
AAAAGTTTTATAAAATCGTTA12.8851e-06
AAAAGTTTTATAGTCCGGAAA12.8851e-06

Read fractions use all reads in this source file as the denominator.