P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATAATAGGTTACTTAGAA12.8851e-06
AAAATAATCACCAACTTTTTA12.8851e-06
AAAATAATCGCATATTGACAA12.8851e-06
AAAATAATCGTTCAGGATATA12.8851e-06
AAAATAATGATAATATGTAGA12.8851e-06
AAAATAATGGCAATATAAAAA12.8851e-06
AAAATAATGGCTTTTATCCGA12.8851e-06
AAAATAATGTTAAGCTACATA12.8851e-06
AAAATAATGTTGAATCAAAAA12.8851e-06
AAAATAATTATCATGAGGATA12.8851e-06
AAAATAATTGTTTAAAAAATA12.8851e-06
AAAATAATTTTGTTTGCATAA12.8851e-06
AAAATACAAACTATAATTATC12.8851e-06
AAAATACAACTGGCAAGAAAA12.8851e-06
AAAATACACATTTTTTTATTA12.8851e-06
AAAATACACGATTTACCTAGA12.8851e-06
AAAATACAGACTTTGAATGAA12.8851e-06
AAAATACAGATCTCCTTCTTA12.8851e-06
AAAATACAGATGTGTCTATAA12.8851e-06
AAAATACAGGTTTAATTTGAA12.8851e-06
AAAATACAGTCATTCTAAAAA12.8851e-06
AAAATACATCTACATTGATTA12.8851e-06
AAAATACATCTGAGTAACGTA12.8851e-06
AAAATACATTGGCAAATGTCA12.8851e-06
AAAATACCATAACGTTAGACA12.8851e-06

Read fractions use all reads in this source file as the denominator.