P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATGATCCATGAGTGTAAA12.8851e-06
AAAATGATCCGTATACTACAA12.8851e-06
AAAATGATCTTGAGCAGTCTA12.8851e-06
AAAATGATGAACGACATCAAA12.8851e-06
AAAATGATGAAGATTTCAGGA12.8851e-06
AAAATGATTACGATAGAAGTA12.8851e-06
AAAATGATTCATTAATTCAGA12.8851e-06
AAAATGATTGTTTGGTAGAAA12.8851e-06
AAAATGATTTCTTGTTCTTGA12.8851e-06
AAAATGATTTGTGTCTGATGA12.8851e-06
AAAATGCAACACCAAAATTGA12.8851e-06
AAAATGCACCATGTCATTATA12.8851e-06
AAAATGCAGAAAATTCTTTAA12.8851e-06
AAAATGCATTCATCACAGTAA12.8851e-06
AAAATGCATTCCCTGGATACA12.8851e-06
AAAATGCCTATAAATCGATCA12.8851e-06
AAAATGCCTCGGTATAAGTAA12.8851e-06
AAAATGCCTCTCCTACTTAAA12.8851e-06
AAAATGCCTTATTTATAGTTA12.8851e-06
AAAATGCGGATCAACTTGTTA12.8851e-06
AAAATGCGGTCTCATTTGGAA12.8851e-06
AAAATGCTATAGGGAGTGTGA12.8851e-06
AAAATGCTCCTTGAATACCTA12.8851e-06
AAAATGCTCTAATATACTAGA12.8851e-06
AAAATGCTGCAACTACGTATA12.8851e-06

Read fractions use all reads in this source file as the denominator.