P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAACTTATTTAGCAAAATGAA12.8851e-06
AAACTTATTTTAGGTTCCTTA12.8851e-06
AAACTTCAAATCTAGTCCTAA12.8851e-06
AAACTTCAACCAGGAGTGACA12.8851e-06
AAACTTCAAGGAGTCTTTACA12.8851e-06
AAACTTCACCAGGCTAAGGTA12.8851e-06
AAACTTCACCTGATTTATCTA12.8851e-06
AAACTTCACCTTACTTATTAA12.8851e-06
AAACTTCACGTCTCTCAGTAA12.8851e-06
AAACTTCACTTTATATTTTAA12.8851e-06
AAACTTCAGGCGGATCAGAGA12.8851e-06
AAACTTCAGGGTGGAAAAGAA12.8851e-06
AAACTTCATAATTCATCGCAA12.8851e-06
AAACTTCATCATGCGTATAAA12.8851e-06
AAACTTCATTTGTGTGGTGAA12.8851e-06
AAACTTCATTTTTAAACATAA12.8851e-06
AAACTTCCAACAGTACTACTA12.8851e-06
AAACTTCCATTTGATCAAGTA12.8851e-06
AAACTTCCCTTTTCAATATGA12.8851e-06
AAACTTCCTACCTTTGATGGA12.8851e-06
AAACTTCCTGTTTTATTGATA12.8851e-06
AAACTTCCTTATCGTACTACA12.8851e-06
AAACTTCCTTCGATGCGTACA12.8851e-06
AAACTTCGAGTAATCTGATCA12.8851e-06
AAACTTCGTAATGTCCTTAGA12.8851e-06

Read fractions use all reads in this source file as the denominator.