P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130409

RV36_s

Reads
346,609
Distinct strings in file
343,747
File size
2.2 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130409
Sample:
SAMEA13317645
SHA-256
63209123a746c0b8c2bca0607556011c2873de60fa60b55e98c583f78bd88cba

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAGATTGCGGGTAAGAGTTA12.8851e-06
AAAGATTGCGTGTTAATATAA12.8851e-06
AAAGATTGCTAGAGTAATCGA12.8851e-06
AAAGATTGCTTACCACAGATA12.8851e-06
AAAGATTGTACGTAAGATAAA12.8851e-06
AAAGATTGTTATCGATGTAGA12.8851e-06
AAAGATTGTTCTATATGATGA12.8851e-06
AAAGATTTAAAACTTAGACTA12.8851e-06
AAAGATTTACAAACAATACAA12.8851e-06
AAAGATTTATCCTACTTATTA12.8851e-06
AAAGATTTCAACCTAAATTGA12.8851e-06
AAAGATTTCCTTTATTTGTCA12.8851e-06
AAAGATTTGAAAGACCTGGTA12.8851e-06
AAAGATTTGCGACTTGCCGTA12.8851e-06
AAAGATTTGTCACCCAAACTA12.8851e-06
AAAGATTTGTCTTACTCTTCA12.8851e-06
AAAGATTTGTGGTGGTGTAAA12.8851e-06
AAAGATTTTAATTAGTACACA12.8851e-06
AAAGATTTTAATTCTTCACTA12.8851e-06
AAAGATTTTATCTTTGATACA12.8851e-06
AAAGATTTTCTAAGAAGTGGA12.8851e-06
AAAGATTTTCTCTCACTATGA12.8851e-06
AAAGATTTTGCGCTGTAAAAA12.8851e-06
AAAGATTTTGTATGATTTCAA25.77019e-06
AAAGCAAAACTACGGACCGAA12.8851e-06

Read fractions use all reads in this source file as the denominator.