P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130411

RV38_s

Reads
362,221
Distinct strings in file
355,290
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130411
Sample:
SAMEA13317647
SHA-256
4cf6d44c7b859f5680aaab5756882824e5749ba1d4d0e65c20b7d0a3e90c7bd9

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTAAGTTTAAGGAATCA12.76075e-06
AAAAGTAATATCCACTCAGGA12.76075e-06
AAAAGTAATGTACTTATTATA12.76075e-06
AAAAGTAATTATCATAGATTA12.76075e-06
AAAAGTAATTCCTTCCAATAA12.76075e-06
AAAAGTACATCATCTTTAAGA12.76075e-06
AAAAGTACCGTCTTTTCCTTA25.52149e-06
AAAAGTACGGTCCATCACGTA12.76075e-06
AAAAGTACTAGGGCTCGTCGA12.76075e-06
AAAAGTACTGTCGAGCCCGTA12.76075e-06
AAAAGTACTTGCAGCGGCTCA12.76075e-06
AAAAGTAGGTAGGATTGCTAA12.76075e-06
AAAAGTAGTGATCATCAAATA12.76075e-06
AAAAGTAGTTAACTAATATAG25.52149e-06
AAAAGTATATAAGATTGACGA12.76075e-06
AAAAGTATATGGAGTATTGAA12.76075e-06
AAAAGTATATTATCAAGAAAA12.76075e-06
AAAAGTATATTGTCAACATTA12.76075e-06
AAAAGTATCAATCTAATAATA12.76075e-06
AAAAGTATGGTATTGCTAAGA12.76075e-06
AAAAGTATGTCATGAGTTAAA12.76075e-06
AAAAGTATGTCCCGGACGCAA12.76075e-06
AAAAGTATTATAGCGTGAGGA12.76075e-06
AAAAGTATTCACTTACTATGA12.76075e-06
AAAAGTATTCGGACTTCAACA12.76075e-06

Read fractions use all reads in this source file as the denominator.