P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130411

RV38_s

Reads
362,221
Distinct strings in file
355,290
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130411
Sample:
SAMEA13317647
SHA-256
4cf6d44c7b859f5680aaab5756882824e5749ba1d4d0e65c20b7d0a3e90c7bd9

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAGGTTGTCCGAAATAA12.76075e-06
AAAAAAGGTTTGAAAGTTAAA12.76075e-06
AAAAAAGTAATCTAGATATAA12.76075e-06
AAAAAAGTAGCATTTTAACTA12.76075e-06
AAAAAAGTATTTCCTCGTAAA12.76075e-06
AAAAAAGTCTCGATTATTCTA12.76075e-06
AAAAAAGTCTTTCGCTGAGGA12.76075e-06
AAAAAAGTGAAGGTTCGAGAA12.76075e-06
AAAAAAGTGCAATCAGGTTCA12.76075e-06
AAAAAAGTGGCTCGGGTTCAA12.76075e-06
AAAAAAGTTAAGCACTCACCA12.76075e-06
AAAAAAGTTACTTGAAATATA12.76075e-06
AAAAAAGTTCATACAGCATTA12.76075e-06
AAAAAAGTTCTGAAGATATGA12.76075e-06
AAAAAAGTTCTTACTTGGTCA12.76075e-06
AAAAAAGTTGTGGCACGTTTA12.76075e-06
AAAAAATAAATATTCAATTAA12.76075e-06
AAAAAATACATAGAAGGCATA12.76075e-06
AAAAAATACCTTAAAGCACTA12.76075e-06
AAAAAATAGCTTGTCTCTATA12.76075e-06
AAAAAATATACATACTGCTGA12.76075e-06
AAAAAATATATGCCATTTTTA25.52149e-06
AAAAAATATTTTAAACATGAA12.76075e-06
AAAAAATCAAAAATACTCACA12.76075e-06
AAAAAATCACATGCCTCATCA12.76075e-06

Read fractions use all reads in this source file as the denominator.