P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

← Back to source counts

ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAAAAAAAAAAAAAAAAAA71.90525e-05
AAAAAAAAAAAAAAAAAAAAG12.72179e-06
AAAAAAAAAATGGATAACGTA12.72179e-06
AAAAAAAAATTGGCATAGATA12.72179e-06
AAAAAAAAGTCTTCTAACTAA12.72179e-06
AAAAAAAAGTTGGAAAGTAGA12.72179e-06
AAAAAAAATTATTTTTTTATA12.72179e-06
AAAAAAAATTCATAGCACTTA12.72179e-06
AAAAAAAATTTACTTTAATGA12.72179e-06
AAAAAAAATTTTACATTGATA12.72179e-06
AAAAAAACACCTGGGCTTATA12.72179e-06
AAAAAAACAGATTTTTTAAGA12.72179e-06
AAAAAAACAGCTAATAAGTTA12.72179e-06
AAAAAAACAGGTGTATTATTA12.72179e-06
AAAAAAACGCGAGGAGAGTCA12.72179e-06
AAAAAAACGGTTTTGTTCACA12.72179e-06
AAAAAAACTCTCCTAGATTTA12.72179e-06
AAAAAAACTTTTGGTAAGTGA12.72179e-06
AAAAAAAGACGTATAGTTTTA12.72179e-06
AAAAAAAGCTATTATCCCTTA12.72179e-06
AAAAAAAGGGATAGACAGGCA12.72179e-06
AAAAAAAGGTAGTGTAAATTA12.72179e-06
AAAAAAAGGTTCGACGATGCA12.72179e-06
AAAAAAAGTCCTTCGCTTTGA12.72179e-06
AAAAAAAGTCTCTCGACCATA12.72179e-06

Read fractions use all reads in this source file as the denominator.