P PanApta
Data & API

Source-file counts

Download and query reviewed source counts

Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTATCTAAAGTACGAAA12.72179e-06
AAAAGTATCTATTATGTTCAA12.72179e-06
AAAAGTATGAGAAGCTACAAA12.72179e-06
AAAAGTATGTGAAGAACAGAA12.72179e-06
AAAAGTATTCATCGAACTGTA12.72179e-06
AAAAGTATTCCTCGACGACGA12.72179e-06
AAAAGTATTTGTTGTTCGGTA12.72179e-06
AAAAGTCAACGCACACGATTA12.72179e-06
AAAAGTCAATGTACCATGGGA12.72179e-06
AAAAGTCACCATCATAATAAA12.72179e-06
AAAAGTCACTCTTTCTTAGTA12.72179e-06
AAAAGTCAGTTAAGCTTTTTA12.72179e-06
AAAAGTCATAAATTCAATGAA12.72179e-06
AAAAGTCATCTATGTCTCTGA12.72179e-06
AAAAGTCATGAACGTTAACCA12.72179e-06
AAAAGTCCACAAGGTCATATA12.72179e-06
AAAAGTCCAGTTTATAATGTA12.72179e-06
AAAAGTCCTCCCTAATTGTAA12.72179e-06
AAAAGTCCTTCTAAATCAGGA12.72179e-06
AAAAGTCCTTTTTGGCCTAGA12.72179e-06
AAAAGTCGCGAGTAGGTTTGA12.72179e-06
AAAAGTCGGTCTTGTGTTTTA12.72179e-06
AAAAGTCTAAAGGGTTGGACA12.72179e-06
AAAAGTCTAATTGATTGTATA12.72179e-06
AAAAGTCTATAGCTGGGTTGA12.72179e-06

Read fractions use all reads in this source file as the denominator.