P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAAGTGGCTCTTTCTGTTTA12.72179e-06
AAAAGTGGCTTTTGTCCGTGA12.72179e-06
AAAAGTGGGATCGGGGGGAGA12.72179e-06
AAAAGTGGGCGTTAAAAAATA12.72179e-06
AAAAGTGGTTATCATTGAATA12.72179e-06
AAAAGTGTATATTAGCTTAAA12.72179e-06
AAAAGTGTCCCCAGTTTGTCA12.72179e-06
AAAAGTGTCGGTGTTCTCTGA12.72179e-06
AAAAGTGTCTCAGGTTTCCTA12.72179e-06
AAAAGTGTTAAAAAAGAACTA12.72179e-06
AAAAGTGTTTTAAGTTCGGTA12.72179e-06
AAAAGTGTTTTGGCATATTAA12.72179e-06
AAAAGTGTTTTGTAGATAAGG12.72179e-06
AAAAGTTAAACTACTACATAA12.72179e-06
AAAAGTTAAATTTATTTTAGA12.72179e-06
AAAAGTTAATTCCTTAGGATC12.72179e-06
AAAAGTTAATTTAAGGTGTCA25.44358e-06
AAAAGTTACCTACATCTCCTA12.72179e-06
AAAAGTTACTAATTACTTAGA12.72179e-06
AAAAGTTACTCATGATTAAAA12.72179e-06
AAAAGTTACTGGATTAAATTA12.72179e-06
AAAAGTTACTGTGTTCCTTCA12.72179e-06
AAAAGTTAGTAAATTCCTGAA12.72179e-06
AAAAGTTATAAATCATGATTA12.72179e-06
AAAAGTTATAAGATCACAGTA12.72179e-06

Read fractions use all reads in this source file as the denominator.