P PanApta
Data & API

Source-file counts

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Public manifest

These collections primarily describe transcription-factor–DNA binding. They include source-reported controls and constructs; file totals are not target or validated aptamer totals.

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ERR9130412

RV39_s

Reads
367,405
Distinct strings in file
363,348
File size
2.3 MiB
Counts (Parquet) Attribution and checksum
Source attribution · SHA-256
Source project:
PRJEB51473
Archive record:
ERR9130412
Sample:
SAMEA13317648
SHA-256
b432e03bddd0ec113ad76c6e1dbb889a5521b5f1388483646d2f5b35deacb930

Exact read query

Queries are case-sensitive. No trimming or reverse-complement merging is applied.

SequenceCountRead fraction
AAAATAGAAATAGTGACGCAA12.72179e-06
AAAATAGAACTACTACCTAAA12.72179e-06
AAAATAGAATCTTTTTGAATA12.72179e-06
AAAATAGAATTATCGTCTTAA12.72179e-06
AAAATAGACAAACATCCTGTA12.72179e-06
AAAATAGATATAAGAAATATA12.72179e-06
AAAATAGATCGTACGTCCCCA12.72179e-06
AAAATAGATTCTTAGACTCTA12.72179e-06
AAAATAGCAAGTGAGTCTGAA12.72179e-06
AAAATAGCTCCTTCAAAATAA12.72179e-06
AAAATAGCTCTTTCTACGACA12.72179e-06
AAAATAGGAGCTCATTAGTTA12.72179e-06
AAAATAGGATACAGTTCAGAA12.72179e-06
AAAATAGGATTTATGCGTTTA12.72179e-06
AAAATAGGATTTTAGTAAATA12.72179e-06
AAAATAGGCACATCTATCTGA12.72179e-06
AAAATAGGTATCAAGTGATCA12.72179e-06
AAAATAGGTATCGATTACTTA12.72179e-06
AAAATAGTAATAGTTTCTTGA12.72179e-06
AAAATAGTATCTGAATAATTA12.72179e-06
AAAATAGTCAATCACTATATA12.72179e-06
AAAATAGTCTGGGCTAGGAAA12.72179e-06
AAAATAGTGATGTACAGCTGA12.72179e-06
AAAATAGTGATTGATTTACAA12.72179e-06
AAAATAGTGGACCAGGATATA12.72179e-06

Read fractions use all reads in this source file as the denominator.